STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35864.1TraF-related protein. (353 aa)    
Predicted Functional Partners:
EEX37314.1
Hypothetical protein.
  
     0.715
EEX35865.1
Hypothetical protein; Belongs to the UPF0181 family.
       0.683
EEX38615.1
Hypothetical protein.
  
     0.673
EEX36375.1
Outer membrane lipoprotein.
  
     0.639
EEX35678.1
Acetolactate synthase small subunit.
  
     0.624
EEX37500.1
Conserved hypothetical protein.
  
     0.618
EEX36386.1
Outer membrane protein.
  
     0.607
EEX36266.1
Mannitol operon repressor.
  
     0.606
EEX38317.1
Outer membrane protein OmpU.
  
     0.600
EEX37203.1
Hypothetical protein.
  
     0.592
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.