STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35872.1Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
EEX35873.1
SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA.
 
     0.731
EEX35875.1
Uncharacterized protein possibly involved in aromatic compounds catabolism; COG2050.
       0.498
EEX36799.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.491
EEX36442.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.475
EEX35874.1
Phosphotransferase system IIA component.
       0.470
EEX37305.1
Transcriptional regulator of alpha-acetolactate operon AlsR; Belongs to the LysR transcriptional regulatory family.
  
     0.454
EEX36996.1
Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.
  
     0.435
EEX38520.1
Hypothetical protein.
  
     0.404
EEX37934.1
Iron-regulated virulence regulatory protein IrgB; Belongs to the LysR transcriptional regulatory family.
  
     0.402
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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