STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35873.1SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA. (562 aa)    
Predicted Functional Partners:
EEX35872.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
 
     0.731
EEX38615.1
Hypothetical protein.
  
     0.667
EEX38033.1
Hypothetical protein.
  
     0.643
EEX35874.1
Phosphotransferase system IIA component.
       0.609
EEX35875.1
Uncharacterized protein possibly involved in aromatic compounds catabolism; COG2050.
       0.609
EEX36266.1
Mannitol operon repressor.
  
     0.605
EEX37327.1
Hypothetical protein.
  
     0.597
EEX37794.1
Smp-like protein.
  
     0.554
EEX37824.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.548
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.523
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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