STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
Experiments
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[Homology]
Score
EEX35875.1Uncharacterized protein possibly involved in aromatic compounds catabolism; COG2050. (53 aa)    
Predicted Functional Partners:
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
    
 0.898
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.851
EEX35874.1
Phosphotransferase system IIA component.
       0.842
EEX36336.1
Isochorismatase of siderophore biosynthesis.
  
 
 0.839
EEX35873.1
SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA.
       0.742
EEX36103.1
Flavodoxin reductases, family 1.
  
 
 0.697
EEX36824.1
NADH oxidoreductase Hcr.
  
 
 0.691
EEX36337.1
2,3-dihydroxybenzoate-AMP ligase.
  
  
 0.630
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
   
 
 0.587
EEX36865.1
4-hydroxybenzoyl-CoA thioesterase.
    
 0.550
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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