Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX35891.1Hypothetical protein. (506 aa)    
Predicted Functional Partners:
EEX35890.1
Hypothetical pyruvate formate lyase activating enzyme.
 
  
 0.888
queE
Queuosine Biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
 
 0.837
EEX35659.1
Signal transduction histidine kinase.
  
 
  0.776
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
    
  0.754
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.677
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
  
 
  0.647
EEX36746.1
Metal-dependent phosphohydrolase.
     
  0.627
EEX37261.1
Ribonucleotide reductase of class Ia (aerobic) beta subunit.
  
 
 0.625
EEX37310.1
GGDEF family protein.
  
 
  0.602
EEX36351.1
Predicted N-ribosylNicotinamide CRP-like regulator.
 
  
  0.570
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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