STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35891.1Hypothetical protein. (506 aa)    
Predicted Functional Partners:
EEX35890.1
Hypothetical pyruvate formate lyase activating enzyme.
 
  
 0.865
EEX35659.1
Signal transduction histidine kinase.
  
 
 0.809
queE
Queuosine Biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
 
 0.808
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
  
 
  0.762
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.761
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
    
  0.751
EEX37310.1
GGDEF family protein.
  
 
  0.744
EEX37261.1
Ribonucleotide reductase of class Ia (aerobic) beta subunit.
  
 
 0.710
EEX35658.1
Multi-sensor hybrid histidine kinase.
  
 
  0.670
EEX37312.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
   
 
  0.599
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.