STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35904.1DNA polymerase III epsilon subunit. (237 aa)    
Predicted Functional Partners:
EEX35905.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.958
EEX35704.1
DNA polymerase III epsilon subunit.
  
  
  0.945
EEX36121.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.900
EEX36579.1
DNA polymerase III alpha subunit.
    
 0.865
EEX37250.1
DNA polymerase III epsilon subunit.
  
  
 
0.853
dnaQ
DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
  
  
  0.835
EEX35652.1
DNA polymerase III beta subunit.
   
 0.834
EEX37249.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.825
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.823
EEX35703.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.796
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.