STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35908.1D-ribulokinase. (547 aa)    
Predicted Functional Partners:
EEX35910.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component 2.
 
  
 0.838
EEX35909.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component 1.
 
  
 0.837
EEX35911.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems ATP-binding protein.
 
    0.837
EEX35912.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems sugar binding protein.
 
  
 0.798
EEX35922.1
Class II aldolase/adducin.
  
 
 0.742
EEX35932.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.742
EEX38056.1
Gluconokinase.
  
  
 0.633
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
    
 0.629
EEX38142.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 0.626
EEX37394.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.609
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.