STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35911.1Ribose/xylose/arabinose/galactoside ABC-type transport systems ATP-binding protein. (497 aa)    
Predicted Functional Partners:
EEX35910.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component 2.
 0.990
EEX35909.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component 1.
 0.989
EEX35912.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems sugar binding protein.
 
 0.981
EEX36276.1
Ribose ABC transport system permease protein RbsC; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 0.968
EEX36277.1
Ribose ABC transport system ribose-binding protein RbsB; TC 3.A.1.2.1.
 
 0.962
rbsD
Ribose ABC transport system high affinity permease RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.869
EEX35908.1
D-ribulokinase.
 
    0.837
EEX36074.1
Autoinducer 2-binding periplasmic protein LuxP precursor.
  
 0.786
EEX35900.1
5-keto-2-deoxygluconokinase.
  
  
 0.579
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.528
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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