STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35915.1Sensor kinase CitA. (551 aa)    
Predicted Functional Partners:
EEX35914.1
Transcriptional regulatory protein CitB.
 
 0.996
EEX37072.1
Transcriptional regulatory protein CitB.
 
 0.936
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
 
 0.665
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
   
 
 0.653
EEX37070.1
Sodium:citrate symporter.
 
  
 0.610
EEX36945.1
Response regulator.
  
 0.609
EEX35918.1
Putative tricarboxylic transport TctC.
 
    0.603
EEX38405.1
BarA sensory histidine kinase.
     
 0.522
EEX35916.1
Retron-type reverse transcriptase.
       0.510
EEX37050.1
Chemotaxis protein CheV.
     
  0.506
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.