STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35917.1Tricarboxylate transport membrane protein tctA. (500 aa)    
Predicted Functional Partners:
EEX35918.1
Putative tricarboxylic transport TctC.
  
 0.944
EEX35950.1
Tricarboxylate transporter family protein.
 
  
 0.934
EEX37690.1
C4-dicarboxylate-binding protein.
  
     0.712
EEX37689.1
TRAP dicarboxylate transporter DctM subunit.
  
     0.693
EEX35914.1
Transcriptional regulatory protein CitB.
 
     0.518
EEX37073.1
Signal transduction histidine kinase regulating citrate/malate metabolism.
 
     0.509
EEX35915.1
Sensor kinase CitA.
 
     0.503
EEX35995.1
Putative ammonia monooxygenase.
 
    0.492
EEX36122.1
Transcriptional regulator KdgR KDG operon repressor.
 
     0.449
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.