STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35918.1Putative tricarboxylic transport TctC. (326 aa)    
Predicted Functional Partners:
EEX35917.1
Tricarboxylate transport membrane protein tctA.
  
 0.944
EEX37690.1
C4-dicarboxylate-binding protein.
  
     0.663
EEX37689.1
TRAP dicarboxylate transporter DctM subunit.
  
     0.620
EEX35914.1
Transcriptional regulatory protein CitB.
 
    0.610
EEX37073.1
Signal transduction histidine kinase regulating citrate/malate metabolism.
 
    0.597
EEX35915.1
Sensor kinase CitA.
 
    0.588
EEX37072.1
Transcriptional regulatory protein CitB.
 
    0.481
EEX35919.1
Transcriptional regulator DeoR family protein.
       0.406
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.