STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35919.1Transcriptional regulator DeoR family protein. (223 aa)    
Predicted Functional Partners:
EEX35717.1
Phosphotransferase system fructose-specific.
 
  
 0.806
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.795
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
 
  
 0.700
EEX36126.1
Ribose 5-phosphate isomerase.
  
 
 0.575
EEX35902.1
5-keto-2-deoxygluconokinase B.
  
  
 0.414
EEX35918.1
Putative tricarboxylic transport TctC.
       0.406
EEX36730.1
Oxidoreductase short-chain dehydrogenase/reductase family.
  
    0.402
EEX37302.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
    0.402
EEX37473.1
Oxidoreductase short-chain dehydrogenase/reductase family.
  
    0.402
EEX37489.1
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.402
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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