STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX35921.1Hypothetical pyridoxal phosphate biosynthesis protein. (418 aa)    
Predicted Functional Partners:
EEX35922.1
Class II aldolase/adducin.
  
 0.985
EEX35920.1
D-beta-hydroxybutyrate dehydrogenase.
 
  
 0.967
EEX35923.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
 0.964
EEX35924.1
NAD-dependent epimerase/dehydratase.
 
    0.902
EEX35925.1
Gluconate transporter.
 
   
 0.728
EEX36256.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.