STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX35927.1Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (816 aa)    
Predicted Functional Partners:
EEX35926.1
Anaerobic dimethyl sulfoxide reductase chain B.
 0.997
EEX37905.1
Anaerobic dimethyl sulfoxide reductase chain B.
 
 0.978
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.961
EEX37904.1
Anaerobic dimethyl sulfoxide reductase chain C.
 
 0.939
EEX37164.1
Iron-sulfur cluster-binding protein.
  
 0.937
EEX37168.1
Formate dehydrogenase-O iron-sulfur subunit; Most likely function alternative not yet resolved; putative formate dehydrogenase iron-sulfur subunit.
 
 0.935
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.790
EEX37817.1
Glutamate synthase [NADPH] large chain.
  
 
 0.756
birA
Biotin-protein ligase/biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
  0.721
EEX37169.1
Formate dehydrogenase -O gamma subunit.
  
 0.712
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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