Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEX35929.1Transcriptional regulator, DeoR family. (251 aa)    
Predicted Functional Partners:
EEX35928.1
Putative L-ascorbate 6-phosphate lactonase.
 
     0.773
EEX35717.1
Phosphotransferase system fructose-specific.
 
  
 0.751
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.712
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
 
  
 0.657
EEX35930.1
PTS system 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT).
 
   
 0.639
EEX35994.1
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.412
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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