STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35932.1L-ribulose-5-phosphate 4-epimerase. (230 aa)    
Predicted Functional Partners:
EEX35935.1
L-xylulose 5-phosphate 3-epimerase.
  
 0.994
EEX35934.1
3-keto-L-gulonate 6-phosphate decarboxylase.
 
 
 0.952
EEX35930.1
PTS system 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT).
 
  
 0.817
EEX35933.1
Predicted hydrolase.
       0.790
EEX35931.1
PTS system IIA component.
  
  
 0.787
EEX35928.1
Putative L-ascorbate 6-phosphate lactonase.
 
   
 0.753
EEX35908.1
D-ribulokinase.
  
 
 0.742
lacZ
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.644
EEX38006.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.612
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.600
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.