Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX35935.1L-xylulose 5-phosphate 3-epimerase. (293 aa)    
Predicted Functional Partners:
EEX35934.1
3-keto-L-gulonate 6-phosphate decarboxylase.
 
 
 0.998
EEX35932.1
L-ribulose-5-phosphate 4-epimerase.
  
 0.997
EEX35930.1
PTS system 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT).
 
  
 0.931
EEX35933.1
Predicted hydrolase.
 
     0.868
EEX35922.1
Class II aldolase/adducin.
 
  
 0.847
EEX35928.1
Putative L-ascorbate 6-phosphate lactonase.
 
   
 0.822
EEX35931.1
PTS system IIA component.
       0.776
EEX37461.1
Putative integral membrane protein.
 
   
 0.738
EEX37460.1
PTS system 3-keto-L-gulonate specific IIA component.
 
     0.713
EEX35908.1
D-ribulokinase.
    
  0.675
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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