Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EEX35938.1iron(III) dicitrate transport system permease protein FecD; TC 3.A.1.14.1; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (350 aa)    
Predicted Functional Partners:
EEX35937.1
ABC transporter related protein.
 
 0.996
EEX36331.1
ABC transporter ATP-binding protein.
 
 0.981
hmuV
ABC-type hemin transport system ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.970
EEX35940.1
Periplasmic binding protein.
 
 0.943
EEX36095.1
Periplasmic hemin-binding protein.
 
 0.927
EEX35939.1
Putative periplasmic iron/siderophore binding protein.
 
 0.910
btuF
Vitamin B12 ABC transporter B12-binding component BtuF; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
 
 0.899
EEX36332.1
Ferric enterobactin transport system permease protein fepG; TC 3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.717
EEX36419.1
iron(III) ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.669
EEX36420.1
Ferric vibriobactin enterobactin transport system ATP-binding protein; TC 3.A.1.14.6.
  
  
 0.595
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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