STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35940.1Periplasmic binding protein. (223 aa)    
Predicted Functional Partners:
EEX35939.1
Putative periplasmic iron/siderophore binding protein.
     0.994
EEX35937.1
ABC transporter related protein.
 
 0.985
EEX35938.1
iron(III) dicitrate transport system permease protein FecD; TC 3.A.1.14.1; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.984
btuC
Vitamin B12 import system permease protein btuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
 
 
 0.941
EEX36096.1
Hemin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.937
EEX36333.1
Ferric enterobactin transport system permease protein fepD; TC 3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.932
EEX36331.1
ABC transporter ATP-binding protein.
  
 0.922
btuD
Vitamin B12 ABC transporter ATPase component BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
    
 0.769
EEX36093.1
Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein.
  
    0.661
EEX36336.1
Isochorismatase of siderophore biosynthesis.
 
    0.578
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.