Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX35950.1Tricarboxylate transporter family protein. (316 aa)    
Predicted Functional Partners:
EEX35917.1
Tricarboxylate transport membrane protein tctA.
 
  
 0.938
EEX37690.1
C4-dicarboxylate-binding protein.
  
     0.712
EEX37689.1
TRAP dicarboxylate transporter DctM subunit.
  
     0.689
EEX35951.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
       0.605
EEX35995.1
Putative ammonia monooxygenase.
 
    0.487
EEX37974.1
TRAP-type uncharacterized transport system fused permease component.
  
     0.486
EEX35949.1
Tellurite resistance protein.
       0.479
EEX36122.1
Transcriptional regulator KdgR KDG operon repressor.
 
  
 0.439
EEX35914.1
Transcriptional regulatory protein CitB.
 
    0.425
EEX37973.1
TRAP transporter solute receptor TAXI family precursor.
  
   
 0.411
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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