STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX35973.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
EEX38458.1
PTS system maltose and glucose-specific IIBC component.
    
  0.804
EEX35972.1
Ribonucleotide reductase of class III (anaerobic) large subunit.
       0.676
EEX36907.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.666
EEX37351.1
Cysteine desulfurase.
    
   0.666
EEX35817.1
PTS system N-acetylmuramic acid-specific IIBC component.
 
  
  0.660
EEX36456.1
MoxR-like ATPase.
  
     0.647
EEX36873.1
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.643
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.634
EEX37114.1
Hypothetical protein.
  
  
 0.609
EEX37397.1
Phosphotransferase system sucrose-specific IIBC component.
    
  0.608
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.