STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZBeta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (1034 aa)    
Predicted Functional Partners:
EEX35983.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.938
EEX35978.1
Alpha-galactosidase.
 
 
 0.929
EEX36602.1
Beta-hexosaminidase.
 
 0.912
EEX37080.1
Alpha-1,6-galactosidase putative.
 
 
 0.881
EEX37424.1
Beta-hexosaminidase.
 
 0.860
EEX38332.1
Beta-hexosaminidase.
 
 0.855
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.695
EEX36132.1
Pectinesterase.
  
  
  0.668
EEX37069.1
Beta-glucosidase-related glycosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.666
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.617
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.