STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZBeta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (1034 aa)    
Predicted Functional Partners:
EEX35978.1
Alpha-galactosidase.
 
  
 0.868
EEX35983.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.811
EEX37080.1
Alpha-1,6-galactosidase putative.
 
  
 0.778
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.754
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.687
EEX37069.1
Beta-glucosidase-related glycosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.666
EEX36123.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.666
EEX35932.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.644
EEX35753.1
Maltose-6'-phosphate glucosidase.
 
  
 0.637
EEX37399.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.633
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.