STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36004.1Transcriptional regulator; COG1309. (259 aa)    
Predicted Functional Partners:
EEX36003.1
ADP-ribose pyrophosphatase.
 
     0.688
EEX37327.1
Hypothetical protein.
  
     0.503
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
 
   0.486
EEX37315.1
Microbial collagenase secreted.
  
     0.480
EEX37997.1
MSHA biogenesis protein MshI.
  
     0.460
EEX36584.1
Autoinducer 1 sensor kinase/phosphatase luxN.
  
 
 
 0.454
EEX36202.1
Hypothetical protein.
  
     0.436
EEX36281.1
Spindolin-related protein.
  
     0.435
EEX36627.1
peptidyl-tRNA hydrolase.
   
    0.427
EEX37506.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.