Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX35898.1 | EEX36009.1 | VIB_002210 | VIB_002322 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.648 |
| EEX35898.1 | EEX36245.1 | VIB_002210 | VIB_002560 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.870 |
| EEX35898.1 | EEX36247.1 | VIB_002210 | VIB_002562 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Proline/sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.447 |
| EEX35898.1 | EEX36822.1 | VIB_002210 | VIB_000928 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Alcohol dehydrogenase; Most likely function alternative not yet resolved; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.685 |
| EEX35898.1 | EEX37268.1 | VIB_002210 | VIB_001388 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | 0.924 |
| EEX35898.1 | EEX37818.1 | VIB_002210 | VIB_001946 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Glutamate synthase [NADPH] small chain. | 0.483 |
| EEX35898.1 | EEX38555.1 | VIB_002210 | VIB_000019 | Methylmalonate-semialdehyde dehydrogenase [inositol]. | Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.611 |
| EEX36009.1 | EEX35898.1 | VIB_002322 | VIB_002210 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Methylmalonate-semialdehyde dehydrogenase [inositol]. | 0.648 |
| EEX36009.1 | EEX36245.1 | VIB_002322 | VIB_002560 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.916 |
| EEX36009.1 | EEX36247.1 | VIB_002322 | VIB_002562 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Proline/sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.632 |
| EEX36009.1 | EEX36822.1 | VIB_002322 | VIB_000928 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Alcohol dehydrogenase; Most likely function alternative not yet resolved; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.640 |
| EEX36009.1 | EEX37268.1 | VIB_002322 | VIB_001388 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | 0.790 |
| EEX36009.1 | EEX37787.1 | VIB_002322 | VIB_001913 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Hypothetical protein. | 0.624 |
| EEX36009.1 | EEX37818.1 | VIB_002322 | VIB_001946 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Glutamate synthase [NADPH] small chain. | 0.619 |
| EEX36009.1 | EEX38211.1 | VIB_002322 | VIB_000585 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Hypothetical protein. | 0.592 |
| EEX36009.1 | EEX38555.1 | VIB_002322 | VIB_000019 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.648 |
| EEX36009.1 | astD | VIB_002322 | VIB_000519 | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.648 |
| EEX36245.1 | EEX35898.1 | VIB_002560 | VIB_002210 | Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Methylmalonate-semialdehyde dehydrogenase [inositol]. | 0.870 |
| EEX36245.1 | EEX36009.1 | VIB_002560 | VIB_002322 | Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.916 |
| EEX36245.1 | EEX36247.1 | VIB_002560 | VIB_002562 | Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Proline/sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.967 |
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