STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36011.1Predicted ABC-type transport system permease component. (813 aa)    
Predicted Functional Partners:
EEX36013.1
Arylesterase precursor.
 
 
   0.984
EEX36012.1
ABC transporter ATP-binding protein.
 
 
 
 0.975
macB
Macrolide export ATP-binding/permease protein macB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.845
EEX37277.1
Hypothetical protein.
 
  
 0.715
EEX36010.1
Hypothetical protein.
       0.662
fabV-2
Uncharacterized paraquat-inducible protein B; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.
       0.654
EEX36132.1
Pectinesterase.
   
   0.619
EEX36015.1
Isopentenyl-diphosphate delta-isomerase.
       0.595
EEX37279.1
ABC-type antimicrobial peptide transport system ATPase component; COG1136.
 
 
 0.562
EEX38467.1
ABC transporter ATP-binding protein.
  
 
 0.496
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.