STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36017.1Putative phosphatase YieH. (233 aa)    
Predicted Functional Partners:
EEX36043.1
Putative phosphatase YqaB.
  
  
 0.850
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.762
EEX36369.1
CbbY family protein.
  
  
0.703
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
    
  0.700
EEX36268.1
Phosphotransferase system mannitol-specific.
    
  0.688
EEX36018.1
Hypothetical protein.
       0.672
EEX35967.1
Fructose-specific phosphocarrier protein HPr/PTS system fructose-specific IIA component.
    
  0.667
EEX37340.1
Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521.
    
  0.643
EEX36392.1
Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing.
    
  0.643
EEX35715.1
Putative PTS system nitrogen regulatory IIA component.
    
  0.610
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.