STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36044.1Fatty acid desaturase; Most likely function alternative not yet resolved; delta-9 fatty acid desaturase. (374 aa)    
Predicted Functional Partners:
EEX36103.1
Flavodoxin reductases, family 1.
     
 0.800
EEX36824.1
NADH oxidoreductase Hcr.
     
 0.798
EEX36822.1
Alcohol dehydrogenase; Most likely function alternative not yet resolved; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.751
EEX36959.1
Oxidoreductase short-chain dehydrogenase/reductase family.
 
 0.659
EEX37261.1
Ribonucleotide reductase of class Ia (aerobic) beta subunit.
  
  
  0.628
EEX37588.1
Oxidoreductase short-chain dehydrogenase/reductase family.
  
 0.585
EEX37471.1
Membrane protein.
  
     0.576
EEX38631.1
Unsaturated fatty acid biosythesis repressor FabR; TetR family regulator.
 
   
 0.532
EEX35708.1
Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
  
 0.516
EEX37262.1
Ferredoxin.
  
  
 0.515
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.