Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36049.1Hypothetical protein. (427 aa)    
Predicted Functional Partners:
EEX36046.1
Zinc ABC transporter permease protein ZnuB.
  
 
 0.851
EEX38347.1
ABC transporter ATP-binding protein.
  
 
 0.713
znuC
Zinc ABC transporter ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 
 0.713
EEX38346.1
Putative permease of ABC transporter.
  
 
 0.677
EEX36707.1
Zinc ABC transporter permease protein ZnuB.
  
 
 0.677
EEX36899.1
Putative GTPase (G3E family).
 
  
 0.646
EEX35947.1
Putative GTPase (G3E family).
 
  
 0.576
EEX36048.1
Zinc-regulated TonB-dependent outer membrane receptor.
       0.547
EEX36047.1
Zinc ABC transporter-binding protein ZnuA.
       0.546
rpsN
SSU ribosomal protein S14p (S29e); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.499
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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