STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36052.12-Oxobutyrate oxidase putative; Belongs to the iron/ascorbate-dependent oxidoreductase family. (331 aa)    
Predicted Functional Partners:
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
  
  
 0.873
EEX36051.1
Methionine gamma-lyase.
     
 0.749
argD
Acetylornithine aminotransferase/N-succinyl-L,L-diaminopimelate aminotransferase/succinylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.587
EEX37459.1
Aspartate/tyrosine/aromatic aminotransferase.
     
 0.584
EEX35924.1
NAD-dependent epimerase/dehydratase.
  
 0.576
EEX36618.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.541
EEX36343.1
FAD monooxygenase PheA/TfdB family.
  
   
 0.522
EEX37009.1
Nucleoside-diphosphate-sugar epimerase.
  
 0.499
EEX35756.1
UDP-glucose 4-epimerase.
   
 0.430
EEX35760.1
UDP-glucose 4-epimerase.
   
 0.430
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.