STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36059.1Chitodextrinase precursor. (958 aa)    
Predicted Functional Partners:
EEX36281.1
Spindolin-related protein.
 
 0.984
EEX36215.1
Chitinase.
 
 
0.969
EEX37715.1
Chitinase.
 
 
 0.932
EEX38332.1
Beta-hexosaminidase.
 
  
 0.928
EEX36602.1
Beta-hexosaminidase.
 
  
 0.886
nagZ
Beta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
     
 0.844
EEX38333.1
Chitobiose phosphorylase.
  
  
 0.839
EEX36876.1
Hypothetical protein.
    
 
 0.814
EEX37135.1
TonB system biopolymer transport component; Most likely function alternative not yet resolved; chromosome segregation ATPase.
    
 
 0.814
EEX37315.1
Microbial collagenase secreted.
 
 
 0.809
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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