Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36075.1Hypothetical protein; Belongs to the UPF0502 family. (210 aa)    
Predicted Functional Partners:
EEX36074.1
Autoinducer 2-binding periplasmic protein LuxP precursor.
       0.668
EEX36073.1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
       0.656
EEX36265.1
Oxidoreductase Gfo/Idh/MocA family.
  
    0.639
EEX36076.1
Hypothetical protein; Belongs to the UPF0265 family.
       0.486
EEX36301.1
Hypothetical protein.
       0.486
EEX37093.1
Putative TEGT family carrier/transport protein; Belongs to the BI1 family.
   
    0.439
EEX36167.1
Metallo-beta-lactamase family protein; Similar to PA00057.
  
     0.421
EEX35831.1
DNA-directed RNA polymerase specialized sigma subunit.
  
     0.401
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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