Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX36093.1Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein. (176 aa)    
Predicted Functional Partners:
EEX36094.1
Putative heme iron utilization protein.
 
  
 0.983
hemH
Ferrochelatase protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.870
cyoE
Heme O synthase protoheme IX farnesyltransferase COX10-CtaB; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.866
EEX36095.1
Periplasmic hemin-binding protein.
 
  
 0.818
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
 
   0.747
EEX36357.1
Biopolymer transport protein ExbD1.
 
  
 0.718
hmuV
ABC-type hemin transport system ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
     0.668
EEX36354.1
TonB-dependent heme and hemoglobin receptor HutA; Most likely function alternative not yet resolved; TonB-dependent hemin ferrichrome receptor.
 
   
 0.668
EEX38595.1
Coproporphyrinogen III oxidase oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
   
 0.667
EEX38266.1
2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
      
 0.563
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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