Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX36108.1Glycerol-3-phosphate regulon repressor DeoR family. (254 aa)    
Predicted Functional Partners:
EEX35717.1
Phosphotransferase system fructose-specific.
 
  
 0.745
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.723
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
 
  
 0.645
EEX35994.1
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.576
EEX36107.1
Putative membrane protein.
       0.530
EEX36106.1
Transcriptional regulator AraC/XylS family.
       0.434
EEX36080.1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
  
 0.421
EEX36109.1
Transcriptional activator protein luxR.
       0.420
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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