STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36118.1Transcriptional regulator. (472 aa)    
Predicted Functional Partners:
EEX37817.1
Glutamate synthase [NADPH] large chain.
   
 
  0.844
gcvP
Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.765
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
   
 
 0.726
EEX37268.1
Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase.
  
 
 0.717
EEX38265.1
Chorismate mutase I/cyclohexadienyl dehydrogenase.
    
 0.703
EEX38259.1
Chorismate mutase I/prephenate dehydratase.
    
 0.702
trpC
Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Belongs to the TrpC family.
   
 
 0.682
EEX37340.1
Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521.
    
  0.660
EEX36392.1
Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing.
    
  0.660
EEX37459.1
Aspartate/tyrosine/aromatic aminotransferase.
  
 0.647
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.