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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX36120.1DNA polymerase III epsilon subunit. (236 aa)    
Predicted Functional Partners:
EEX36121.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.968
EEX35704.1
DNA polymerase III epsilon subunit.
  
  
  0.944
EEX37250.1
DNA polymerase III epsilon subunit.
  
  
 
0.858
dnaQ
DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
  
  
  0.838
EEX37249.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.816
EEX35905.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.807
EEX36579.1
DNA polymerase III alpha subunit.
    
 0.782
EEX35703.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
 
 
  0.766
EEX35652.1
DNA polymerase III beta subunit.
   
 0.732
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.715
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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