STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36122.1Transcriptional regulator KdgR KDG operon repressor. (260 aa)    
Predicted Functional Partners:
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.853
EEX36212.1
Transcriptional regulator.
  
     0.747
EEX36822.1
Alcohol dehydrogenase; Most likely function alternative not yet resolved; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.693
EEX36123.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
     0.658
EEX36120.1
DNA polymerase III epsilon subunit.
       0.610
EEX36121.1
Signal transduction protein; Containing cAMP-binding and CBS domains.
       0.610
EEX37689.1
TRAP dicarboxylate transporter DctM subunit.
 
  
  0.607
EEX36144.1
Oligogalacturonate lyase.
 
   
 0.570
EEX37690.1
C4-dicarboxylate-binding protein.
 
     0.567
fadI
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 
 0.517
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.