Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEX36125.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
EEX36144.1
Oligogalacturonate lyase.
 
  
 0.901
EEX36126.1
Ribose 5-phosphate isomerase.
 
     0.872
EEX36123.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
  
 0.782
EEX36124.1
Hypothetical protein.
       0.773
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.620
EEX37680.1
Alkylhydroperoxidase like protein AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
  
 0.533
EEX38259.1
Chorismate mutase I/prephenate dehydratase.
  
 
 0.515
EEX37641.1
Flagellar motor rotation protein MotA.
    
   0.515
EEX36321.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.515
cobB
NAD-dependent protein deacetylase of SIR2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.480
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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