STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36130.12-dehydro-3-deoxygluconate kinase. (310 aa)    
Predicted Functional Partners:
EEX36131.1
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase.
 
 
 0.889
EEX35717.1
Phosphotransferase system fructose-specific.
    
 0.848
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.804
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
     
 0.770
EEX35902.1
5-keto-2-deoxygluconokinase B.
 
 
 0.748
EEX36123.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 0.693
rbsD
Ribose ABC transport system high affinity permease RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.666
EEX38142.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.649
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.618
EEX35899.1
Inosose dehydratase.
  
 
 0.602
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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