STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36132.1Pectinesterase. (854 aa)    
Predicted Functional Partners:
EEX36134.1
Exopolygalacturonate lyase.
 0.910
EEX37264.1
Hypothetical protein.
  
 0.822
EEX36174.1
Invasin.
  
 0.822
EEX36175.1
Invasin.
  
 0.822
EEX35747.1
Large exoprotein involved in heme utilization or adhesion.
  
 0.736
EEX37984.1
MSHA biogenesis protein MshQ.
   
  0.688
EEX35830.1
Chromosome segregation ATPase.
   
  0.688
EEX38333.1
Chitobiose phosphorylase.
  
  
 0.608
EEX36133.1
Methyl-accepting chemotaxis protein.
       0.590
EEX37399.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.542
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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