Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX36134.1Exopolygalacturonate lyase. (742 aa)    
Predicted Functional Partners:
EEX36144.1
Oligogalacturonate lyase.
 
  
 0.963
EEX36132.1
Pectinesterase.
 
 0.888
EEX36141.1
Exopolygalacturonate lyase.
     
 0.872
EEX37399.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
 
  0.766
EEX36456.1
MoxR-like ATPase.
  
     0.709
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.702
EEX37327.1
Hypothetical protein.
  
     0.698
EEX36710.1
Signal transduction histidine kinase.
  
     0.693
EEX37051.1
Hypothetical protein.
  
     0.676
EEX37506.1
Hypothetical protein.
  
     0.676
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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