STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36151.1Transcriptional activator of acetoin/glycerol metabolism; COG3284. (629 aa)    
Predicted Functional Partners:
EEX36147.1
PTS-dependent dihydroxyacetone kinase ADP-binding subunit DhaL.
   
 
 0.916
EEX36148.1
PTS-dependent dihydroxyacetone kinase dihydroxyacetone binding subunit DhaK.
   
 
 0.906
EEX36146.1
Dihydroxyacetone kinase ATP-dependent.
   
 
 0.887
EEX38226.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.803
EEX37551.1
Regulatory protein LuxO.
  
     0.757
EEX36150.1
Glycerol dehydrogenase.
  
  
 0.687
EEX36149.1
Hypothetical protein.
       0.509
EEX36152.1
Hypothetical protein.
       0.495
EEX35911.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems ATP-binding protein.
   
    0.443
EEX36275.1
Ribose ABC transport system ATP-binding protein RbsA; TC 3.A.1.2.1.
   
    0.443
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.