STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36156.1Phospholipase/lecithinase/hemolysin. (418 aa)    
Predicted Functional Partners:
EEX36461.1
Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
    
 
 0.730
EEX37699.1
Oligoendopeptidase F.
  
     0.686
EEX37315.1
Microbial collagenase secreted.
  
   
 0.628
EEX35943.1
Outer membrane protein.
  
   
 0.589
EEX36458.1
Hypothetical protein.
  
     0.566
EEX35963.1
Sensor histidine kinase CqsS.
  
  
 0.556
EEX38615.1
Hypothetical protein.
  
     0.555
EEX38003.1
Lipid A core-O-antigen ligase.
  
     0.547
EEX37404.1
Hypothetical protein.
  
     0.539
EEX38345.1
ABC-type metal ion transport system component/surface adhesin.
  
     0.536
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.