STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36196.1Transcriptional regulator MerR family. (270 aa)    
Predicted Functional Partners:
EEX36197.1
Hypothetical protein.
  
  
 0.935
EEX37817.1
Glutamate synthase [NADPH] large chain.
    
 0.914
EEX36195.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
  
 0.913
EEX36194.1
Hypothetical protein.
       0.842
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
   
 0.822
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
   
 0.767
EEX38028.1
Glutamine synthetase type I.
  
 
 0.728
EEX37815.1
Aerobic respiration control sensor protein ArcB.
   
 0.697
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.696
queF
NADPH dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
    
 0.694
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.