STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36201.1GGDEF family protein. (526 aa)    
Predicted Functional Partners:
EEX36951.1
Hypothetical protein.
 
 0.897
EEX36021.1
Predicted signal transduction protein.
 
 0.896
EEX38607.1
Sensory box/GGDEF family protein.
 
 0.889
EEX37815.1
Aerobic respiration control sensor protein ArcB.
 
 0.869
EEX37310.1
GGDEF family protein.
 
  0.852
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
 
0.851
EEX36183.1
Response regulator receiver modulated diguanylate phosphodiesterase.
 
  0.848
EEX38405.1
BarA sensory histidine kinase.
 
 0.829
EEX37544.1
EAL domain protein.
 
 
  0.817
EEX36366.1
Rtn protein.
 
     0.770
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.