STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36225.1Pole remodelling regulatory diguanylate cyclase. (415 aa)    
Predicted Functional Partners:
EEX37815.1
Aerobic respiration control sensor protein ArcB.
 
 0.997
EEX38405.1
BarA sensory histidine kinase.
 0.994
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
 
 0.991
EEX36021.1
Predicted signal transduction protein.
 
 0.982
EEX36951.1
Hypothetical protein.
 
 
 0.966
EEX37310.1
GGDEF family protein.
 
 0.963
EEX37183.1
Signal transduction histidine kinase.
 0.956
EEX35659.1
Signal transduction histidine kinase.
 0.945
EEX36073.1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 0.943
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
 
 0.938
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.