STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36227.1DNA photolyase. (514 aa)    
Predicted Functional Partners:
EEX36226.1
Cell-cell signaling protein C-factor.
 
   
 0.919
EEX37087.1
Deoxyribodipyrimidine photolyase single-strand-specific; Belongs to the DNA photolyase family.
 
   
 0.857
EEX37337.1
Deoxyribodipyrimidine photolyase/cryptochrome family protein.
 
   
 0.793
EEX36195.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.651
EEX36963.1
Putative lipoprotein.
 
     0.635
EEX36961.1
Hypothetical protein.
 
   
 0.604
EEX36960.1
Amine oxidase flavin-containing.
 
   
 0.598
EEX36958.1
Putative transcriptional regulator.
 
   
 0.537
EEX36228.1
Methyl-accepting chemotaxis protein.
       0.469
EEX36346.1
Putative sodium-dependent bicarbonate transporter.
  
     0.469
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.