STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36233.1Chromosome (plasmid) partitioning protein ParA. (407 aa)    
Predicted Functional Partners:
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
 
 
 0.982
EEX35644.1
Chromosome (plasmid) partitioning protein ParB/stage 0 sporulation protein J; Belongs to the ParB family.
 
 
 0.917
EEX38450.1
Chromosome (plasmid) partitioning protein ParB.
  
 
 0.717
EEX36584.1
Autoinducer 1 sensor kinase/phosphatase luxN.
 
   0.694
EEX37327.1
Hypothetical protein.
  
     0.681
EEX37506.1
Hypothetical protein.
  
     0.681
EEX36873.1
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.672
EEX36456.1
MoxR-like ATPase.
  
     0.666
EEX36202.1
Hypothetical protein.
  
     0.644
btuB
Outer membrane vitamin B12 receptor BtuB; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.
    
   0.640
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.