Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEX36240.1Predicted polymerase. (460 aa)    
Predicted Functional Partners:
EEX38014.1
Chemotaxis protein CheX.
  
     0.708
EEX36239.1
Che cluster related two-component response regulator.
  
    0.678
EEX36762.1
Hypothetical protein.
  
     0.642
EEX37523.1
ATPase involved in DNA repair.
  
     0.637
EEX35789.1
Lipopolysaccharide heptosyltransferase I.
  
    0.609
EEX38045.1
General secretion pathway protein N.
  
     0.572
EEX36728.1
ATPase involved in DNA repair.
  
     0.572
EEX38624.1
Flagellar biosynthesis protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.567
EEX37997.1
MSHA biogenesis protein MshI.
  
     0.562
EEX38201.1
Hypothetical protein.
  
     0.558
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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