STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36254.1Putative NADH-flavin reductase; COG2910. (211 aa)    
Predicted Functional Partners:
EEX36614.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.729
EEX35881.1
Predicted ATP-dependent endonuclease of the OLD family.
   
    0.675
EEX36061.1
Iron-containing alcohol dehydrogenase.
  
  
 0.658
EEX36253.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.648
arcA
Arginine deiminase.
   
    0.643
EEX37587.1
Predicted nucleoside-diphosphate sugar epimerase.
   
    0.643
EEX36507.1
Hypothetical protein.
   
    0.643
EEX37303.1
Acetolactate synthase catabolic; Belongs to the TPP enzyme family.
  
    0.538
EEX38523.1
Type I site-specific deoxyribonuclease HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
    0.476
EEX38524.1
Type I restriction-modification system specificity subunit S.
  
    0.456
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.