STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36257.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
EEX36951.1
Hypothetical protein.
      
 0.560
EEX37699.1
Oligoendopeptidase F.
  
     0.553
EEX36919.1
Putative transport protein.
  
     0.520
EEX35720.1
Lysine/cadaverine antiporter membrane protein CadB.
  
     0.508
EEX36884.1
Hypothetical protein.
  
     0.504
EEX35719.1
Lysine decarboxylase.
  
     0.443
EEX37329.1
Hypothetical protein; Belongs to the UPF0263 family.
  
     0.434
EEX36156.1
Phospholipase/lecithinase/hemolysin.
  
     0.433
EEX35722.1
Transcriptional activator of cad operon.
  
     0.423
EEX37404.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.